STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308675_02313Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_000308675_02314
Unannotated protein.
  
    0.834
GCA_000308675_02229
Unannotated protein.
  
 
 0.740
GCA_000308675_05257
Unannotated protein.
   
 
 0.739
GCA_000308675_00924
Unannotated protein.
   
 0.733
GCA_000308675_04805
Unannotated protein.
   
 0.733
GCA_000308675_05206
Unannotated protein.
  
 0.667
GCA_000308675_02312
Unannotated protein.
       0.663
GCA_000308675_02315
Unannotated protein.
       0.650
GCA_000308675_03872
Unannotated protein.
      0.554
GCA_000308675_04167
Unannotated protein.
    
  0.544
Your Current Organism:
Nocardia paucivorans
NCBI taxonomy Id: 1206734
Other names: N. paucivorans NBRC 100373, Nocardia paucivorans NBRC 100373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.