STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308695_00134Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_000308695_03440
Unannotated protein.
     
 0.831
GCA_000308695_03768
Unannotated protein.
   
 
 0.802
GCA_000308695_03654
Unannotated protein.
 
  
 0.780
GCA_000308695_01106
Unannotated protein.
    
 0.754
GCA_000308695_05386
Unannotated protein.
    
 0.754
GCA_000308695_02124
Unannotated protein.
     
 0.743
GCA_000308695_03187
Unannotated protein.
    
 0.694
GCA_000308695_06637
Unannotated protein.
    
 0.673
GCA_000308695_00133
Unannotated protein.
  
    0.645
GCA_000308695_05772
Unannotated protein.
   
 
 0.609
Your Current Organism:
Nocardia takedensis
NCBI taxonomy Id: 1206735
Other names: N. takedensis NBRC 100417, Nocardia takedensis NBRC 100417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.