STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308695_01334Unannotated protein. (201 aa)    
Predicted Functional Partners:
GCA_000308695_01335
Unannotated protein.
 
    0.834
GCA_000308695_03939
Unannotated protein.
   
 0.702
GCA_000308695_01343
Unannotated protein.
 
     0.626
GCA_000308695_05708
Unannotated protein.
  
     0.596
GCA_000308695_04913
Unannotated protein.
 
     0.585
GCA_000308695_01336
Unannotated protein.
 
     0.583
GCA_000308695_00857
Unannotated protein.
   
  0.560
GCA_000308695_02364
Unannotated protein.
   
  0.560
GCA_000308695_02365
Unannotated protein.
   
  0.560
GCA_000308695_02374
Unannotated protein.
   
  0.560
Your Current Organism:
Nocardia takedensis
NCBI taxonomy Id: 1206735
Other names: N. takedensis NBRC 100417, Nocardia takedensis NBRC 100417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.