STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308695_02891Unannotated protein. (494 aa)    
Predicted Functional Partners:
GCA_000308695_03893
Unannotated protein.
  
 
 0.986
GCA_000308695_02194
Unannotated protein.
  
 
 0.974
GCA_000308695_04472
Unannotated protein.
  
 
 0.974
GCA_000308695_02806
Unannotated protein.
 
 0.958
GCA_000308695_02327
Unannotated protein.
 
 0.927
GCA_000308695_02804
Unannotated protein.
  
 0.917
GCA_000308695_02098
Unannotated protein.
  
 0.900
GCA_000308695_02645
Unannotated protein.
  
 0.898
GCA_000308695_06020
Unannotated protein.
  
 
 0.898
GCA_000308695_05257
Unannotated protein.
    
 0.886
Your Current Organism:
Nocardia takedensis
NCBI taxonomy Id: 1206735
Other names: N. takedensis NBRC 100417, Nocardia takedensis NBRC 100417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.