STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308695_07012Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000308695_07013
Unannotated protein.
       0.752
GCA_000308695_07014
Unannotated protein.
       0.641
GCA_000308695_03950
Unannotated protein.
      
 0.544
GCA_000308695_07015
Unannotated protein.
       0.508
GCA_000308695_07016
Unannotated protein.
  
    0.508
GCA_000308695_01561
Unannotated protein.
 
 
  0.465
GCA_000308695_05434
Unannotated protein.
  
     0.454
GCA_000308695_06996
Unannotated protein.
  
     0.454
GCA_000308695_05440
Unannotated protein.
  
     0.449
GCA_000308695_03242
Unannotated protein.
  
     0.435
Your Current Organism:
Nocardia takedensis
NCBI taxonomy Id: 1206735
Other names: N. takedensis NBRC 100417, Nocardia takedensis NBRC 100417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.