STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308755_01122Unannotated protein. (477 aa)    
Predicted Functional Partners:
GCA_000308755_01123
Unannotated protein.
 
    0.943
GCA_000308755_01118
Unannotated protein.
  
    0.731
GCA_000308755_04839
Unannotated protein.
 
 
 0.653
GCA_000308755_01117
Unannotated protein.
 
  0.621
GCA_000308755_04840
Unannotated protein.
 
 
  0.603
GCA_000308755_01124
Unannotated protein.
       0.565
GCA_000308755_04155
Unannotated protein.
  
 
  0.526
GCA_000308755_05626
Unannotated protein.
 
  0.513
GCA_000308755_05228
Unannotated protein.
   
 0.458
GCA_000308755_02911
Unannotated protein.
 
 
  0.453
Your Current Organism:
Nocardia pneumoniae
NCBI taxonomy Id: 1206737
Other names: N. pneumoniae NBRC 100136, Nocardia pneumoniae NBRC 100136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.