STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308775_00047Unannotated protein. (349 aa)    
Predicted Functional Partners:
GCA_000308775_00044
Unannotated protein.
 
     0.970
GCA_000308775_00050
Unannotated protein.
 
     0.953
GCA_000308775_00045
Unannotated protein.
 
 
  0.951
GCA_000308775_00046
Unannotated protein.
 
 
  0.949
GCA_000308775_00048
Unannotated protein.
 
 
  0.944
GCA_000308775_00049
Unannotated protein.
 
 
  0.942
GCA_000308775_00043
Unannotated protein.
 
     0.929
GCA_000308775_01238
Unannotated protein.
  
 
  0.719
GCA_000308775_00639
Unannotated protein.
  
  
  0.698
GCA_000308775_05119
Unannotated protein.
 
  
 0.697
Your Current Organism:
Nocardia testacea
NCBI taxonomy Id: 1206739
Other names: N. testacea NBRC 100365, Nocardia testacea NBRC 100365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.