STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308775_02278Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000308775_02280
Unannotated protein.
 
  
 0.975
GCA_000308775_01876
Unannotated protein.
 
  
 0.941
GCA_000308775_02275
Unannotated protein.
 
 
 0.941
GCA_000308775_03912
Unannotated protein.
 
  
 0.925
GCA_000308775_04035
Unannotated protein.
    
 0.884
GCA_000308775_03603
Unannotated protein.
 
  
 0.858
GCA_000308775_02277
Unannotated protein.
    
 0.848
GCA_000308775_02282
Unannotated protein.
 
   
 0.820
GCA_000308775_04897
Unannotated protein.
    
 0.780
GCA_000308775_05346
Unannotated protein.
 
  
 0.632
Your Current Organism:
Nocardia testacea
NCBI taxonomy Id: 1206739
Other names: N. testacea NBRC 100365, Nocardia testacea NBRC 100365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.