STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308775_05984Unannotated protein. (522 aa)    
Predicted Functional Partners:
GCA_000308775_06780
Unannotated protein.
 0.891
GCA_000308775_04879
Unannotated protein.
 
 
 
 0.794
GCA_000308775_05983
Unannotated protein.
       0.737
GCA_000308775_03951
Unannotated protein.
    
 0.721
GCA_000308775_04528
Unannotated protein.
 
 0.672
GCA_000308775_01385
Unannotated protein.
    
 
 0.655
GCA_000308775_06781
Unannotated protein.
 
 
   0.652
GCA_000308775_02538
Unannotated protein.
  
 0.632
GCA_000308775_06782
Unannotated protein.
 
 
 
 0.629
GCA_000308775_02573
Unannotated protein.
  
 
 0.590
Your Current Organism:
Nocardia testacea
NCBI taxonomy Id: 1206739
Other names: N. testacea NBRC 100365, Nocardia testacea NBRC 100365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.