STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308855_01988Unannotated protein. (190 aa)    
Predicted Functional Partners:
GCA_000308855_01987
Unannotated protein.
       0.885
GCA_000308855_00614
Unannotated protein.
     0.811
GCA_000308855_01989
Unannotated protein.
     
 0.760
GCA_000308855_04187
Unannotated protein.
  
    0.704
GCA_000308855_04173
Unannotated protein.
  
  
 0.599
GCA_000308855_05723
Unannotated protein.
     
 0.594
GCA_000308855_00842
Unannotated protein.
      
 0.540
GCA_000308855_02754
Unannotated protein.
      
 0.533
GCA_000308855_02006
Unannotated protein.
  
    0.518
GCA_000308855_02007
Unannotated protein.
       0.515
Your Current Organism:
Nocardia veterana
NCBI taxonomy Id: 1206743
Other names: N. veterana NBRC 100344, Nocardia veterana NBRC 100344
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.