STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308875_00569Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000308875_00570
Unannotated protein.
  
  
 0.917
GCA_000308875_02183
Unannotated protein.
  
     0.767
GCA_000308875_03544
Unannotated protein.
  
     0.752
GCA_000308875_02903
Unannotated protein.
  
     0.749
GCA_000308875_01760
Unannotated protein.
  
     0.748
GCA_000308875_00571
Unannotated protein.
       0.746
GCA_000308875_06533
Unannotated protein.
  
     0.744
GCA_000308875_07718
Unannotated protein.
  
     0.734
GCA_000308875_04495
Unannotated protein.
  
     0.724
GCA_000308875_07018
Unannotated protein.
  
     0.723
Your Current Organism:
Nocardia transvalensis
NCBI taxonomy Id: 1206744
Other names: N. transvalensis NBRC 15921, Nocardia transvalensis NBRC 15921
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.