STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJW19265.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit PorA.
 
  
  0.724
cdr
Coenzyme A disulfide reductase Cdr; Belongs to the sulfur carrier protein TusA family.
  
    0.553
EJW17138.1
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit.
  
  
  0.550
EJW19264.1
Hypothetical protein.
       0.538
pdhD-2
Dihydrolipoyl dehydrogenase PdhD.
 
  
 0.479
bfmBC
Dihydrolipoyl dehydrogenase.
 
  
 0.475
EJW19266.1
ABC transporter ATP-binding protein.
       0.473
pdhD
Dihydrolipoyl dehydrogenase PdhD.
 
  
 0.473
Your Current Organism:
Paenibacillus alvei
NCBI taxonomy Id: 1206781
Other names: P. alvei DSM 29, Paenibacillus alvei ATCC 6344, Paenibacillus alvei DSM 29, Paenibacillus alvei IFO 3343
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.