STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sseA3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)    
Predicted Functional Partners:
C100_15210
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
C100_10780
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.935
C100_10770
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
    
 0.933
C100_07655
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.928
C100_07660
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.928
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.927
C100_17000
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.926
C100_22875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.921
C100_17055
Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.913
C100_15205
Small-conductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.848
Your Current Organism:
Sphingobium sp. C100
NCBI taxonomy Id: 1207055
Other names: S. sp. C100
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