STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L53_01885Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (670 aa)    
Predicted Functional Partners:
L53_12495
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.960
L53_07975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.957
L53_13205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.948
L53_02530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.795
L53_07100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.778
L53_16070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.765
L53_10980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.599
L53_09145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.595
L53_13210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.576
L53_05160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.570
Your Current Organism:
Hyphomonas sp. L53140
NCBI taxonomy Id: 1207058
Other names: H. sp. L-53-1-40, Hyphomonas sp. L-53-1-40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.