STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L53_03655Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (242 aa)    
Predicted Functional Partners:
L53_03645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.744
L53_03650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.738
crcB
Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.732
L53_03640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RluA family.
       0.693
L53_09330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.651
L53_04450
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.619
L53_02770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.601
L53_11825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.523
L53_15085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.513
L53_02745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0262 family.
  
     0.502
Your Current Organism:
Hyphomonas sp. L53140
NCBI taxonomy Id: 1207058
Other names: H. sp. L-53-1-40, Hyphomonas sp. L-53-1-40
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