STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchBLight-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (523 aa)    
Predicted Functional Partners:
bchN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 0.999
chlL
Protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
 
 0.999
P24_09021
2-vinyl bacteriochlorophyllide hydratase.
 
 
 0.996
P24_09006
Bacteriochlorophyll/chlorophyll a synthase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
 
 0.989
bchH
Magnesium chelatase subunit H; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
  
 0.984
P24_09046
Mg-protoporphyrin IX methyl transferase; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase.
 
  
 0.977
acsF
Magnesium-protoporphyrin IX monomethyl ester cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
 
 
 0.971
P24_09131
Chlorophyllide reductase iron protein subunit X; COG1348 Nitrogenase subunit NifH (ATPase); Belongs to the NifH/BchL/ChlL family.
  
 
 0.966
P24_09126
Chlorophyllide reductase subunit Y.
  
 
 0.955
P24_09051
Photosynthetic complex (LH1) assembly protein LhaA; COG0477 Permeases of the major facilitator superfamily.
 
    0.953
Your Current Organism:
Oceanibaculum indicum
NCBI taxonomy Id: 1207063
Other names: O. indicum P24, Oceanibaculum indicum P24, Oceanibaculum indicum str. P24, Oceanibaculum indicum strain P24
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