STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfACytochrome c552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (480 aa)    
Predicted Functional Partners:
napA
Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.945
B224_1991
Formate-dependent nitrite reductase, membrane subunit.
 
  
 0.936
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
  
 0.936
B224_5125
Nitrite reductase small subunit.
   
 
 0.934
B224_0728
Nitrite reductase [NADH] large subunit.
  
 
 0.927
B224_3569
Periplasmic nitrate reductase, diheme cytochrome c subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.925
B224_5123
Nitrite reductase, large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.910
B224_0726
nirB-1; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.908
B224_3512
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.906
B224_0717
NasA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.905
Your Current Organism:
Aeromonas media
NCBI taxonomy Id: 1208104
Other names: A. media WS, Aeromonas media WS
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