STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B30_00740Ferredoxin; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (91 aa)    
Predicted Functional Partners:
B30_00745
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.871
B30_00735
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.861
B30_00750
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.773
B30_00755
COG0289 Dihydrodipicolinate reductase; Belongs to the DapB family.
       0.768
dapA-2
Strongly dihydropicolinate synthase (DHDPS)-like protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.768
B30_00730
ABC transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
     0.569
B30_18607
Hypothetical protein.
  
     0.510
Your Current Organism:
Celeribacter baekdonensis
NCBI taxonomy Id: 1208323
Other names: C. baekdonensis B30, Celeribacter baekdonensis B30, Celeribacter baekdonensis str. B30, Celeribacter baekdonensis strain B30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.