STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B30_18002Two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (240 aa)    
Predicted Functional Partners:
B30_18007
COG0642 Signal transduction histidine kinase.
 
 0.981
B30_07431
GAF sensor-containing diguanylate cyclase; COG2203 FOG: GAF domain.
  
 0.976
B30_20753
PAS sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.969
B30_08333
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
 0.961
B30_11265
Globin-coupled methyl-accepting chemotaxis protein; COG1017 Hemoglobin-like flavoprotein.
  
 0.870
B30_17465
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.868
B30_18012
COG3462 Predicted membrane protein.
 
     0.866
B30_09938
COG0642 Signal transduction histidine kinase.
 0.864
B30_15456
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.862
B30_00045
COG0642 Signal transduction histidine kinase.
 
 0.843
Your Current Organism:
Celeribacter baekdonensis
NCBI taxonomy Id: 1208323
Other names: C. baekdonensis B30, Celeribacter baekdonensis B30, Celeribacter baekdonensis str. B30, Celeribacter baekdonensis strain B30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.