STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P73_2546COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (257 aa)    
Predicted Functional Partners:
P73_1224
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
 
  0.918
P73_1222
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
  0.917
P73_2012
COG2030 Acyl dehydratase.
 
 0.912
P73_2547
Phospholipase-like protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
 
 
   0.858
P73_1055
FabG; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.719
P73_2369
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.509
P73_3532
COG4553 Poly-beta-hydroxyalkanoate depolymerase.
  
   
 0.433
P73_1676
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
 
 0.418
P73_3531
COG3243 Poly(3-hydroxyalkanoate) synthetase.
 
  
 0.415
P73_0319
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
   0.413
Your Current Organism:
Celeribacter indicus
NCBI taxonomy Id: 1208324
Other names: C. indicus, Celeribacter indicus Lai et al. 2014, Celeribacter sp. P73, DSM 27257, LMG 27600, LMG:27600, MCCC 1A01112, Pseudoruegeria sp. P73, strain P73
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