STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMX_05435Hypothetical protein. (454 aa)    
Predicted Functional Partners:
COMX_00900
Two component hybrid sensor histidine kinase and regulator; COG0642 Signal transduction histidine kinase.
 
 
 0.882
COMX_00595
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
  
  0.874
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.863
alaS
alanyl-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
 0.857
COMX_06095
Hypothetical protein; COG2319 FOG: WD40 repeat.
   
 0.857
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.840
COMX_02460
Cyclic nucleotide-regulated Na/H exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
    
 0.806
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.789
COMX_02335
Hypothetical protein.
  
 
   0.775
COMX_02340
Hypothetical protein.
  
 
   0.775
Your Current Organism:
Commensalibacter sp. MX01
NCBI taxonomy Id: 1208583
Other names: C. sp. MX01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.