STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF90103.1Sensor histidine kinase YesM. (447 aa)    
Predicted Functional Partners:
SDF90072.1
Two-component system, AgrA family, response regulator AgrA.
 
 
 0.981
SDF87511.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.790
SDF95898.1
Ribose transport system substrate-binding protein.
    
 0.768
SDG32147.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.764
SDF77740.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
 0.615
SDF98825.1
Two-component system, OmpR family, response regulator protein BraR/BceR.
  
 0.615
SDG13131.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
 0.615
SDG17070.1
Two-component system, OmpR family, response regulator VicR.
  
 0.615
SDG09036.1
Response regulator receiver domain-containing protein.
  
 0.615
SDG24983.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
 0.615
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.