STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF79552.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SDF79482.1
ATP-dependent protease ClpP, protease subunit; Belongs to the peptidase S14 family.
       0.752
SDF79516.1
Phage major capsid protein, HK97 family.
       0.752
SDF79583.1
Hypothetical protein.
       0.732
SDF79613.1
Hypothetical protein.
       0.732
SDF79641.1
Hypothetical protein.
       0.732
SDF79672.1
Hypothetical protein.
       0.732
SDF79701.1
Hypothetical protein.
       0.676
SDF79739.1
Hypothetical protein.
       0.622
SDF79451.1
Phage portal protein, HK97 family.
       0.478
SDF79402.1
Phage terminase, small subunit.
       0.458
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.