STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG00121.1D-proline reductase (dithiol) PrdB. (155 aa)    
Predicted Functional Partners:
SDG00030.1
Hypothetical protein.
       0.752
SDG00060.1
2-phospho-L-lactate guanylyltransferase.
       0.752
SDG00090.1
Transferase 2, rSAM/selenodomain-associated.
       0.752
SDG01251.1
Glycine reductase.
 
  
 0.529
SDG51401.1
Glycine reductase.
 
  
 0.503
SDG00008.1
Rhodanese-related sulfurtransferase.
       0.500
SDG00893.1
Selenocysteine-specific elongation factor.
 
   
 0.458
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.