STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF97158.1Alkaline phosphatase; Belongs to the alkaline phosphatase family. (615 aa)    
Predicted Functional Partners:
folE
GTP cyclohydrolase I.
   
 
 0.860
SDF89218.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase/GTP cyclohydrolase I.
   
 
 0.860
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
    
 
 0.808
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.758
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
    
 
 0.747
SDG35412.1
Predicted polyphosphate-or ATP-dependent NAD kinase.
  
  
  0.607
SDG25832.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.605
SDG32369.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.605
SDF95262.1
Calcineurin-like phosphoesterase.
 
  
 0.600
SDG39012.1
ADP-ribose pyrophosphatase.
     
 0.592
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.