STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF97394.1TatD DNase family protein. (267 aa)    
Predicted Functional Partners:
SDF97363.1
tRNA A37 threonylcarbamoyladenosine dehydratase.
     0.988
SDG23939.1
Glycine/D-amino acid oxidase.
    
 0.537
SDF97287.1
Putative lysine transport system permease protein.
  
    0.523
SDF97427.1
Hypothetical protein.
       0.519
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
    
  0.492
SDF97456.1
Predicted acetyltransferase.
       0.464
SDF97315.1
Putative lysine transport system ATP-binding protein.
       0.451
SDG30938.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.449
SDG39140.1
Cysteine desulfurase.
    
 0.444
SDG55182.1
Cysteine desulfurase.
    
 0.444
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.