Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF97529.1 | SDF97564.1 | SAMN05421791_10279 | SAMN05421791_10280 | Conserved hypothetical integral membrane protein. | Hypothetical protein. | 0.520 |
SDF97529.1 | SDF97600.1 | SAMN05421791_10279 | SAMN05421791_10281 | Conserved hypothetical integral membrane protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.514 |
SDF97564.1 | SDF97529.1 | SAMN05421791_10280 | SAMN05421791_10279 | Hypothetical protein. | Conserved hypothetical integral membrane protein. | 0.520 |
SDF97564.1 | SDF97600.1 | SAMN05421791_10280 | SAMN05421791_10281 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.774 |
SDF97564.1 | SDF97629.1 | SAMN05421791_10280 | SAMN05421791_10282 | Hypothetical protein. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.454 |
SDF97600.1 | SDF97529.1 | SAMN05421791_10281 | SAMN05421791_10279 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Conserved hypothetical integral membrane protein. | 0.514 |
SDF97600.1 | SDF97564.1 | SAMN05421791_10281 | SAMN05421791_10280 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Hypothetical protein. | 0.774 |
SDF97600.1 | SDF97629.1 | SAMN05421791_10281 | SAMN05421791_10282 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.460 |
SDF97629.1 | SDF97564.1 | SAMN05421791_10282 | SAMN05421791_10280 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Hypothetical protein. | 0.454 |
SDF97629.1 | SDF97600.1 | SAMN05421791_10282 | SAMN05421791_10281 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.460 |