STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG10225.1Spermidine/putrescine transport system permease protein. (272 aa)    
Predicted Functional Partners:
SDG10150.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.999
SDG10183.1
Spermidine/putrescine transport system permease protein.
 
 0.999
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.999
SDF99982.1
Putative spermidine/putrescine transport system ATP-binding protein.
 0.962
SDF99942.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.774
SDG54425.1
iron(III) transport system permease protein.
 
 
 0.704
SDG54399.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.685
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
  
  
 0.567
SDG10121.1
Hypothetical protein.
       0.542
SDF99883.1
Putative spermidine/putrescine transport system substrate-binding protein.
    
  0.505
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.