Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF95799.1 | SDG08945.1 | SAMN05421791_10235 | SAMN05421791_1035 | DNA-binding transcriptional regulator, AcrR family. | Replication initiator protein A (RepA) N-terminus. | 0.537 |
SDF95799.1 | SDG31128.1 | SAMN05421791_10235 | SAMN05421791_10522 | DNA-binding transcriptional regulator, AcrR family. | Mobilisation protein (MobC). | 0.726 |
SDF95799.1 | SDG31285.1 | SAMN05421791_10235 | SAMN05421791_10528 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.769 |
SDF95799.1 | SDG44697.1 | SAMN05421791_10235 | SAMN05421791_10925 | DNA-binding transcriptional regulator, AcrR family. | Energy-coupling factor transport system substrate-specific component. | 0.761 |
SDF95799.1 | SDG44722.1 | SAMN05421791_10235 | SAMN05421791_10926 | DNA-binding transcriptional regulator, AcrR family. | Energy-coupling factor transport system permease protein. | 0.736 |
SDF95799.1 | SDG44732.1 | SAMN05421791_10235 | SAMN05421791_10927 | DNA-binding transcriptional regulator, AcrR family. | Energy-coupling factor transport system ATP-binding protein. | 0.704 |
SDG08945.1 | SDF95799.1 | SAMN05421791_1035 | SAMN05421791_10235 | Replication initiator protein A (RepA) N-terminus. | DNA-binding transcriptional regulator, AcrR family. | 0.537 |
SDG08945.1 | SDG08979.1 | SAMN05421791_1035 | SAMN05421791_1036 | Replication initiator protein A (RepA) N-terminus. | RDD family protein. | 0.527 |
SDG08945.1 | SDG31128.1 | SAMN05421791_1035 | SAMN05421791_10522 | Replication initiator protein A (RepA) N-terminus. | Mobilisation protein (MobC). | 0.770 |
SDG08945.1 | SDG31252.1 | SAMN05421791_1035 | SAMN05421791_10527 | Replication initiator protein A (RepA) N-terminus. | Putative ABC transport system permease protein. | 0.455 |
SDG08945.1 | SDG31285.1 | SAMN05421791_1035 | SAMN05421791_10528 | Replication initiator protein A (RepA) N-terminus. | Hypothetical protein. | 0.750 |
SDG08945.1 | SDG44697.1 | SAMN05421791_1035 | SAMN05421791_10925 | Replication initiator protein A (RepA) N-terminus. | Energy-coupling factor transport system substrate-specific component. | 0.671 |
SDG08945.1 | SDG44722.1 | SAMN05421791_1035 | SAMN05421791_10926 | Replication initiator protein A (RepA) N-terminus. | Energy-coupling factor transport system permease protein. | 0.648 |
SDG08945.1 | SDG44732.1 | SAMN05421791_1035 | SAMN05421791_10927 | Replication initiator protein A (RepA) N-terminus. | Energy-coupling factor transport system ATP-binding protein. | 0.575 |
SDG08979.1 | SDG08945.1 | SAMN05421791_1036 | SAMN05421791_1035 | RDD family protein. | Replication initiator protein A (RepA) N-terminus. | 0.527 |
SDG31128.1 | SDF95799.1 | SAMN05421791_10522 | SAMN05421791_10235 | Mobilisation protein (MobC). | DNA-binding transcriptional regulator, AcrR family. | 0.726 |
SDG31128.1 | SDG08945.1 | SAMN05421791_10522 | SAMN05421791_1035 | Mobilisation protein (MobC). | Replication initiator protein A (RepA) N-terminus. | 0.770 |
SDG31128.1 | SDG31252.1 | SAMN05421791_10522 | SAMN05421791_10527 | Mobilisation protein (MobC). | Putative ABC transport system permease protein. | 0.623 |
SDG31128.1 | SDG31285.1 | SAMN05421791_10522 | SAMN05421791_10528 | Mobilisation protein (MobC). | Hypothetical protein. | 0.812 |
SDG31128.1 | SDG44697.1 | SAMN05421791_10522 | SAMN05421791_10925 | Mobilisation protein (MobC). | Energy-coupling factor transport system substrate-specific component. | 0.695 |
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