Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG34104.1 | SDG34140.1 | SAMN05421791_1061 | SAMN05421791_1062 | Transposase. | Hypothetical protein. | 0.512 |
SDG34140.1 | SDG34104.1 | SAMN05421791_1062 | SAMN05421791_1061 | Hypothetical protein. | Transposase. | 0.512 |
SDG34140.1 | SDG34170.1 | SAMN05421791_1062 | SAMN05421791_1063 | Hypothetical protein. | 23S rRNA (cytosine1962-C5)-methyltransferase. | 0.566 |
SDG34140.1 | SDG34202.1 | SAMN05421791_1062 | SAMN05421791_1064 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.526 |
SDG34140.1 | SDG34220.1 | SAMN05421791_1062 | SAMN05421791_1065 | Hypothetical protein. | Putative ABC transport system permease protein. | 0.513 |
SDG34170.1 | SDG34140.1 | SAMN05421791_1063 | SAMN05421791_1062 | 23S rRNA (cytosine1962-C5)-methyltransferase. | Hypothetical protein. | 0.566 |
SDG34170.1 | SDG34202.1 | SAMN05421791_1063 | SAMN05421791_1064 | 23S rRNA (cytosine1962-C5)-methyltransferase. | Putative ABC transport system ATP-binding protein. | 0.738 |
SDG34170.1 | SDG34220.1 | SAMN05421791_1063 | SAMN05421791_1065 | 23S rRNA (cytosine1962-C5)-methyltransferase. | Putative ABC transport system permease protein. | 0.723 |
SDG34202.1 | SDG34140.1 | SAMN05421791_1064 | SAMN05421791_1062 | Putative ABC transport system ATP-binding protein. | Hypothetical protein. | 0.526 |
SDG34202.1 | SDG34170.1 | SAMN05421791_1064 | SAMN05421791_1063 | Putative ABC transport system ATP-binding protein. | 23S rRNA (cytosine1962-C5)-methyltransferase. | 0.738 |
SDG34202.1 | SDG34220.1 | SAMN05421791_1064 | SAMN05421791_1065 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.963 |
SDG34220.1 | SDG34140.1 | SAMN05421791_1065 | SAMN05421791_1062 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.513 |
SDG34220.1 | SDG34170.1 | SAMN05421791_1065 | SAMN05421791_1063 | Putative ABC transport system permease protein. | 23S rRNA (cytosine1962-C5)-methyltransferase. | 0.723 |
SDG34220.1 | SDG34202.1 | SAMN05421791_1065 | SAMN05421791_1064 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.963 |