STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG34202.1Putative ABC transport system ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SDG31252.1
Putative ABC transport system permease protein.
 
 0.999
SDG34220.1
Putative ABC transport system permease protein.
 
 
 0.963
SDG51800.1
Polar amino acid transport system substrate-binding protein.
 
 
 0.884
SDF89899.1
ATP-binding cassette, subfamily B.
     
0.857
SDG26679.1
Peptide/nickel transport system permease protein.
 
 
    0.799
SDF97287.1
Putative lysine transport system permease protein.
 
 
 0.750
SDG34170.1
23S rRNA (cytosine1962-C5)-methyltransferase.
       0.738
SDF77852.1
Putative ABC transport system permease protein.
 
 0.716
SDG51735.1
ATP-binding cassette, subfamily B.
    
0.715
SDG52663.1
Putative ABC transport system permease protein.
 
0.710
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.