STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG44632.1AraC-type DNA-binding protein. (315 aa)    
Predicted Functional Partners:
SDG44678.1
ATP-binding cassette, subfamily B.
 
  
 0.846
SDG44647.1
ATP-binding cassette, subfamily B.
 
  
 0.845
SDG44697.1
Energy-coupling factor transport system substrate-specific component.
 
    0.771
SDG14419.1
Para-aminobenzoate synthetase.
     
 0.769
SDG44732.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.737
SDG44722.1
Energy-coupling factor transport system permease protein.
 
     0.713
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.680
SDG31128.1
Mobilisation protein (MobC).
 
     0.548
SDG31285.1
Hypothetical protein.
  
   
 0.541
SDG31439.1
Two-component system, sensor histidine kinase YesM.
 
  
 0.530
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.