STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG55563.1Two-component system, NarL family, response regulator LiaR. (210 aa)    
Predicted Functional Partners:
SDG55533.1
Two-component system, NarL family, sensor histidine kinase LiaS.
 0.994
SDG13516.1
Signal transduction histidine kinase.
 0.984
SDG55502.1
Predicted membrane protein.
 
  
 0.936
SDG01527.1
Signal transduction histidine kinase.
 
 0.929
SDG37782.1
Sugar or nucleoside kinase, ribokinase family.
  
 0.803
SDG55593.1
Uncharacterized protein YneR.
       0.561
SDG13575.1
Putative adhesin.
 
    0.553
SDF77769.1
Signal transduction histidine kinase.
   
 0.543
SDF90103.1
Sensor histidine kinase YesM.
   
 0.543
SDF98863.1
Two-component system, OmpR family, sensor histidine kinase BraS/BceS.
   
 0.543
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.