STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG55593.1Uncharacterized protein YneR. (103 aa)    
Predicted Functional Partners:
SDG23665.1
octanoyl-[GcvH]:protein N-octanoyltransferase.
  
     0.774
SDG41515.1
Carboxylesterase.
  
    0.768
SDG55617.1
Uncharacterized membrane protein.
       0.732
SDG16970.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
     0.664
SDG23939.1
Glycine/D-amino acid oxidase.
  
     0.607
SDG55502.1
Predicted membrane protein.
       0.590
SDG02969.1
Uncharacterized membrane protein, required for colicin V production.
  
     0.570
SDG55533.1
Two-component system, NarL family, sensor histidine kinase LiaS.
       0.570
SDG55563.1
Two-component system, NarL family, response regulator LiaR.
       0.561
SDF86832.1
Uncharacterized protein YpiB, UPF0302 family.
  
     0.560
Your Current Organism:
Facklamia miroungae
NCBI taxonomy Id: 120956
Other names: CCUG 42728, CIP 106764, F. miroungae, Facklamia miroungae Hoyles et al. 2001, Facklamia sp. CCUG 42728, Facklamia sp. CCUG42728, strain A/G13/99/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.