STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CORC01_11566Nonselective cation channel. (688 aa)    
Predicted Functional Partners:
CORC01_13811
SCP-2 sterol transfer family protein.
  
 0.662
CORC01_10036
Short chain dehydrogenase.
  
 0.662
CORC01_12597
Uncharacterized protein.
    
  0.651
CORC01_10786
Uncharacterized protein.
  
 0.651
CORC01_08547
AlcB domain-containing protein.
    
  0.651
MRI1
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
  
 
  0.605
CORC01_11479
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.601
CORC01_12491
Acyl-CoA dehydrogenase domain-containing protein.
  
 0.600
CORC01_11979
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.548
CORC01_10367
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.548
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.