STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CORC01_11110Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
CORC01_04417
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.927
CORC01_13931
Eukaryotic initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.926
CORC01_03433
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.921
CORC01_01685
ABC transporter.
   
 
 0.857
CORC01_01021
RNA recognition domain-containing protein.
   
 0.854
CORC01_09292
Uncharacterized protein.
   
 0.844
CORC01_10103
Nuclear cap-binding protein subunit 2.
    
 0.829
CORC01_09482
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.787
CORC01_11922
Domain found in IF2B/IF5.
   
 0.769
CORC01_01336
ABC transporter.
   
 
 0.768
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.