STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CORC01_00230Importin N-terminal domain-containing protein. (1279 aa)    
Predicted Functional Partners:
CORC01_00176
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.997
CORC01_08936
Nuclear pore glycoprotein p62.
   
 0.972
CORC01_05133
Uncharacterized protein.
    
 0.861
CORC01_13809
RanBP1 domain-containing protein.
    
 0.860
CORC01_08794
Uncharacterized protein.
    
 0.860
CORC01_01400
Uncharacterized protein.
    
 
 0.847
CORC01_11221
Nucleoporin autopeptidase.
   
 0.798
CORC01_12839
Uncharacterized protein.
    
 
 0.795
CORC01_12779
Nucleoporin NUP49/NSP49.
    
 0.790
CORC01_04735
Uncharacterized protein.
    
 0.790
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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