STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSAL01_04474Mannan endo-1,6-alpha-mannosidase. (500 aa)    
Predicted Functional Partners:
CSAL01_01455
Kinase activator.
    
 0.813
CSAL01_02437
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.806
CSAL01_11219
Protein kinase domain-containing protein.
    
 
 0.625
CSAL01_05704
Sphingolipid long chain base-responsive protein LSP1.
  
 
   0.555
CSAL01_06088
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.540
CSAL01_11298
Transient receptor potential ion channel.
  
     0.453
CSAL01_09839
Transient receptor potential ion channel.
  
     0.440
CSAL01_10629
Lovastatin nonaketide synthase.
    
 0.434
CSAL01_03942
Acyl-CoA ligase.
  
  
  0.419
CSAL01_06510
ATG11 domain-containing protein.
    
 
 0.417
Your Current Organism:
Colletotrichum salicis
NCBI taxonomy Id: 1209931
Other names: C. salicis, CBS 607.94, Colletotrichum salicis (Fuckel) Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012s, Glomerella miyabeana, Sphaeria salicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.