STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSAL01_11561Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
CSAL01_12633
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.657
CSAL01_09478
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
  0.589
CSAL01_10237
2Fe-2S iron-sulfur cluster binding domain-containing protein.
   
 0.543
CSAL01_09480
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.541
CSAL01_10629
Lovastatin nonaketide synthase.
  
  0.516
CSAL01_05321
Malonyl CoA-acyl carrier protein transacylase.
  
 0.434
CSAL01_06758
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.417
CSAL01_01135
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.408
Your Current Organism:
Colletotrichum salicis
NCBI taxonomy Id: 1209931
Other names: C. salicis, CBS 607.94, Colletotrichum salicis (Fuckel) Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012s, Glomerella miyabeana, Sphaeria salicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.