STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSAL01_13565Bax Inhibitor family protein; Belongs to the BI1 family. (337 aa)    
Predicted Functional Partners:
CSAL01_10688
Cyclic nucleotide-binding domain-containing protein.
 
      0.798
CSAL01_08730
Peptidase M16 inactive domain-containing protein.
   
   0.716
CSAL01_12470
BSD domain-containing protein.
   
    0.643
CSAL01_08065
Synaptobrevin; Belongs to the synaptobrevin family.
      
 0.501
CSAL01_05369
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.459
CSAL01_00660
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.457
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
      
 0.447
CSAL01_06158
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.441
CSAL01_01592
Vesicle transport V-SNARE protein.
      
 0.400
Your Current Organism:
Colletotrichum salicis
NCBI taxonomy Id: 1209931
Other names: C. salicis, CBS 607.94, Colletotrichum salicis (Fuckel) Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012s, Glomerella miyabeana, Sphaeria salicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.