STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO21347.1acyl-CoA dehydrogenase. (376 aa)    
Predicted Functional Partners:
CDO21349.1
acyl-CoA dehydrogenase.
  
 0.998
CDO21348.1
acyl-CoA dehydrogenase.
  
 0.997
CDO21344.1
Short chain dehydrogenase.
 
 
 0.991
CDO21298.1
Coenzyme A transferase.
  
 
  0.948
CDO21299.1
Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta.
  
 
  0.885
CDO21300.1
2-nitropropane dioxygenase.
  
 
 0.885
CDO21345.1
acyl-CoA dehydrogenase.
 
  
0.883
CDO21346.1
acyl-CoA synthetase.
 
 
 0.877
CDO21297.1
enoyl-CoA hydratase.
  
 0.848
CDO21245.1
acyl-CoA dehydrogenase domain-containing protein.
 
   
 0.834
Your Current Organism:
Mycolicibacterium mageritense
NCBI taxonomy Id: 1209984
Other names: M. mageritense DSM 44476 = CIP 104973, Mycobacterium mageritense 938, Mycobacterium mageritense ATCC 700351, Mycobacterium mageritense CCUG 37984, Mycobacterium mageritense CIP 104973, Mycobacterium mageritense DSM 44476, Mycobacterium mageritense DSM 44476 = CIP 104973, Mycolicibacterium mageritense CIP 104973 = DSM 44476, Mycolicibacterium mageritense DSM 44476 = CIP 104973
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.