STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE90274.1KEGG: cpy:Cphy_3246 ROK family protein. (304 aa)    
Predicted Functional Partners:
AEE91872.1
KEGG: tpd:Teth39_1823 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: Phosphotransferase system, N-acetylglucosamine-specific IIBC component; Phosphotransferase system, glucose-like IIB component; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
 
 0.920
AEE90275.1
Citrate transporter; PFAM: Divalent ion symporter; KEGG: tmt:Tmath_0532 citrate transporter.
       0.660
AEE90277.1
KEGG: cpy:Cphy_3245 hypothetical protein.
  
  
 0.533
AEE92269.1
Transcriptional regulator, RpiR family; PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: ate:Athe_1993 RpiR family transcriptional regulator.
 
  
 0.477
AEE91864.1
Transcriptional regulator, RpiR family; PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: toc:Toce_0337 transcriptional regulator, RpiR family.
 
  
 0.476
AEE90278.1
KEGG: cpy:Cphy_3244 hypothetical protein.
       0.450
AEE90276.1
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: ttm:Tthe_1718 hydantoinase/oxoprolinase.
       0.437
AEE92226.1
KEGG: pjd:Pjdr2_6214 transcriptional regulator, RpiR family; manually curated; PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS).
 
  
 0.417
AEE92141.1
HAMAP: Uncharacterised protein family UPF0309; KEGG: gyc:GYMC61_2233 hypothetical protein; Belongs to the UPF0309 family.
 
    0.416
AEE90279.1
PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: cpy:Cphy_3243 hypothetical protein.
       0.413
Your Current Organism:
Tepidanaerobacter acetatoxydans
NCBI taxonomy Id: 1209989
Other names: T. acetatoxydans Re1, Tepidanaerobacter acetatoxydans Re1, Tepidanaerobacter acetatoxydans str. Re1, Tepidanaerobacter acetatoxydans strain Re1, Tepidanaerobacter sp. Re1
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