STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDUnannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (126 aa)    
Predicted Functional Partners:
GCA_000295735_01686
Unannotated protein.
 
 
 0.999
panB
Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.989
A7X75_18200
Unannotated protein.
     
 0.948
GCA_000295735_01446
Unannotated protein.
   
 
 0.942
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.935
ABW45_05280
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.874
pgi
Unannotated protein; Belongs to the GPI family.
       0.855
selO
Unannotated protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
  
 
 0.854
GCA_000295735_02583
Unannotated protein.
  
  
 0.779
ABW45_12485
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.681
Your Current Organism:
Stenotrophomonas maltophilia S028
NCBI taxonomy Id: 1210005
Other names: S. maltophilia S028, Stenotrophomonas maltophilia str. S028, Stenotrophomonas maltophilia strain S028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.