STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B277_12146TadE family protein; Overlaps another CDS with the same product name. (131 aa)    
Predicted Functional Partners:
B277_12156
Type II secretion system protein with F domain; COG2064 Flp pilus assembly protein TadC; overlaps another CDS with the same product name.
 
    0.967
B277_12141
TadE family protein; Overlaps another CDS with the same product name.
 
     0.961
B277_12161
Type II secretion system protein with F domain; COG4965 Flp pilus assembly protein TadB; overlaps another CDS with the same product name.
 
    0.961
B277_12151
Hypothetical protein.
 
     0.957
B277_12136
Hypothetical protein.
 
     0.943
B277_12166
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
    0.840
B277_03108
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
    0.834
B277_13224
SAF domain-containing protein.
 
    0.793
B277_13234
Hypothetical protein.
  
     0.757
B277_13229
Excisionase family DNA binding domain-containing protein; COG1910 Periplasmic molybdate-binding protein/domain.
  
     0.718
Your Current Organism:
Janibacter hoylei
NCBI taxonomy Id: 1210046
Other names: J. hoylei PVAS-1, Janibacter hoylei DSM 21601, Janibacter hoylei MTCC 8307, Janibacter hoylei PVAS-1, Janibacter hoylei str. PVAS-1, Janibacter hoylei strain PVAS-1, Janibacter sp. PVAS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.