STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001625085_01293Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_001625085_06939
Unannotated protein.
  
 0.744
GCA_001625085_02680
Unannotated protein.
  
     0.708
GCA_001625085_00745
Unannotated protein.
  
   
 0.705
GCA_001625085_03914
Unannotated protein.
  
     0.681
GCA_001625085_05936
Unannotated protein.
  
     0.662
GCA_001625085_01707
Unannotated protein.
  
 0.660
GCA_001625085_01617
Unannotated protein.
    
  0.651
GCA_001625085_02549
Unannotated protein.
    
  0.651
GCA_001625085_03302
Unannotated protein.
  
     0.651
GCA_001625085_04231
Unannotated protein.
    
  0.651
Your Current Organism:
Nocardia acidivorans
NCBI taxonomy Id: 1210062
Other names: N. acidivorans NBRC 108247, Nocardia acidivorans NBRC 108247
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.