STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612685_01882Unannotated protein. (88 aa)    
Predicted Functional Partners:
GCA_001612685_01883
Unannotated protein.
   
 0.957
GCA_001612685_00523
Unannotated protein.
   
 0.928
GCA_001612685_05026
Unannotated protein.
   
 0.928
GCA_001612685_01925
Unannotated protein.
 
 
 0.850
GCA_001612685_05544
Unannotated protein.
 
 
 0.850
GCA_001612685_05543
Unannotated protein.
 
  
 0.742
GCA_001612685_01881
Unannotated protein.
       0.732
GCA_001612685_02392
Unannotated protein.
 
  
 0.700
GCA_001612685_02826
Unannotated protein.
  
  
 0.569
GCA_001612685_00077
Unannotated protein.
  
  
 0.566
Your Current Organism:
Nocardia altamirensis
NCBI taxonomy Id: 1210064
Other names: N. altamirensis NBRC 108246, Nocardia altamirensis NBRC 108246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.