STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612685_05720Unannotated protein. (428 aa)    
Predicted Functional Partners:
GCA_001612685_05719
Unannotated protein.
       0.480
GCA_001612685_05718
Unannotated protein.
    
  0.452
GCA_001612685_04321
Unannotated protein.
     
 0.450
GCA_001612685_00096
Unannotated protein.
  
     0.435
GCA_001612685_07273
Unannotated protein.
  
     0.424
GCA_001612685_05691
Unannotated protein.
    
 0.412
GCA_001612685_03120
Unannotated protein.
  
     0.408
GCA_001612685_08103
Unannotated protein.
 
 
  0.407
Your Current Organism:
Nocardia altamirensis
NCBI taxonomy Id: 1210064
Other names: N. altamirensis NBRC 108246, Nocardia altamirensis NBRC 108246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.