STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612785_02489Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_001612785_02488
Unannotated protein.
  
    0.889
GCA_001612785_02491
Unannotated protein.
       0.710
GCA_001612785_02490
Unannotated protein.
  
    0.577
GCA_001612785_02163
Unannotated protein.
  
     0.481
GCA_001612785_01164
Unannotated protein.
  
     0.480
GCA_001612785_02867
Unannotated protein.
  
     0.457
GCA_001612785_03186
Unannotated protein.
  
     0.457
GCA_001612785_01110
Unannotated protein.
  
     0.443
GCA_001612785_05453
Unannotated protein.
  
     0.426
GCA_001612785_02151
Unannotated protein.
  
     0.413
Your Current Organism:
Nocardia beijingensis
NCBI taxonomy Id: 1210068
Other names: N. beijingensis NBRC 16342, Nocardia beijingensis NBRC 16342
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.