STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612785_02639Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_001612785_02803
Unannotated protein.
  
  
  0.672
GCA_001612785_02083
Unannotated protein.
  
  
 
0.603
GCA_001612785_02084
Unannotated protein.
  
  
 
0.601
GCA_001612785_00069
Unannotated protein.
  
  
  0.587
GCA_001612785_06470
Unannotated protein.
  
     0.583
GCA_001612785_02082
Unannotated protein.
  
  
 
0.575
GCA_001612785_04502
Unannotated protein.
  
  
 
0.568
GCA_001612785_01069
Unannotated protein.
  
 0.565
GCA_001612785_01514
Unannotated protein.
  
 0.565
GCA_001612785_02397
Unannotated protein.
  
 0.565
Your Current Organism:
Nocardia beijingensis
NCBI taxonomy Id: 1210068
Other names: N. beijingensis NBRC 16342, Nocardia beijingensis NBRC 16342
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.