STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612885_02180Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_001612885_02181
Unannotated protein.
 0.982
GCA_001612885_02965
Unannotated protein.
 0.969
GCA_001612885_03833
Unannotated protein.
   
 0.946
GCA_001612885_02721
Unannotated protein.
 
 0.934
GCA_001612885_05034
Unannotated protein.
  
 0.924
GCA_001612885_00522
Unannotated protein.
 0.914
GCA_001612885_02223
Unannotated protein.
 
 0.908
GCA_001612885_05189
Unannotated protein.
 0.873
GCA_001612885_00383
Unannotated protein.
 
 0.872
GCA_001612885_02700
Unannotated protein.
  
 0.834
Your Current Organism:
Nocardia harenae
NCBI taxonomy Id: 1210074
Other names: N. harenae NBRC 108248, Nocardia harenae NBRC 108248
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.